Welcome to deepBase
deepBase, a platform for annotating and discovering small and long ncRNAs (microRNAs, siRNAs, piRNAs...) from next generation sequencing data.
deepBase allows the mapping, storage, retrieval, analysis, integration, annotation, mining and visualization of next generation sequencing data from different technological platforms, tissues and cell lines of different organisms.
deepBase also provided an integrative, interactive and versatile web graphical interface to display multidimensional data, and facilitate transcriptomic research and the discovery of novel ncRNAs. >>Tutorial
If you interested in long noncoding RNAs(lncRNAs, lincRNAs) and microRNAs, we think you also interested in our novel
which we have developed to decode the expression profiles and transcriptional regulation of long non-coding RNAs, microRNAs, other ncRNAs(snoRNAs, tRNAs, snRNAs, etc.) and protein-coding genes from ChIP-Seq data.