Welcome to deepBase
deepBase, a platform for annotating and discovering small and long ncRNAs (microRNAs, siRNAs, piRNAs...) from next generation sequencing data.
deepBase allows the mapping, storage, retrieval, analysis, integration, annotation, mining and visualization of next generation sequencing data from different technological platforms, tissues and cell lines of different organisms.
deepBase also provided an integrative, interactive and versatile web graphical interface to display multidimensional data, and facilitate transcriptomic research and the discovery of novel ncRNAs. >>Tutorial
If you interested in long noncoding RNAs(lncRNAs, lincRNAs) microRNAs, snoRNAs and circRNAs, we think you also interested in our novel
deepBase V2.0 platform,
which we have developed to decode Identification, Expression, Evolution and Function of Small RNAs (snoRNAs, miRNAs, tRNAs, snRNAs etc.), LncRNAs and Circular RNAs from small and long RNA sequencing Data.